Analysing and simulating energy-based models in biology using BondGraphTools
Published online: 13 December 2021
DOI: 10.1140/epje/s10189-021-00152-4
The European Physical Journal E - Soft Matter and Biological Physics
Advances in Computational Methods for Biological Physics
Moumita Das, Alexander G. Fletcher, Karsten Kruse and Rastko Sknepnek
Open Access
AI-driven prediction of SARS-CoV-2 variant binding trends from atomistic simulations
Published online: 06 October 2021
DOI: 10.1140/epje/s10189-021-00119-5
Open Access
A C++ expression system for partial differential equations enables generic simulations of biological hydrodynamics
Published online: 23 September 2021
DOI: 10.1140/epje/s10189-021-00121-x
Open Access
Erratum
Correction to: A mechanical test of the tenertaxis hypothesis forleukocyte diapedesis
Published online: 14 September 2021
DOI: 10.1140/epje/s10189-021-00117-7
Modeling spatiotemporally varying protein–protein interactions in CyLaKS, the Cytoskeleton Lattice-based Kinetic Simulator
Published online: 18 August 2021
DOI: 10.1140/epje/s10189-021-00097-8
Morphologies of compressed active epithelial monolayers
Published online: 21 July 2021
DOI: 10.1140/epje/s10189-021-00094-x
Open Access
A mechanical test of the tenertaxis hypothesis for leukocyte diapedesis
Published online: 08 July 2021
DOI: 10.1140/epje/s10189-021-00096-9
Modeling mechanochemical pattern formation in elastic sheets of biological matter
Published online: 22 June 2021
DOI: 10.1140/epje/s10189-021-00086-x
Open Access
Diffusive search and trajectories on tubular networks: a propagator approach
Published online: 18 June 2021
DOI: 10.1140/epje/s10189-021-00083-0
Comparison of explicit and mean-field models of cytoskeletal filaments with crosslinking motors
Published online: 29 March 2021
DOI: 10.1140/epje/s10189-021-00042-9
